# SSU rRNA gene sequences from marine sediments, marine subseafloor, and deep seawater # M. Rappe, PI # Version 22 Sep 2016 ========================= database ------------------------- GenBank ========================= BioSample_ID BioProjectID lat lon ph oxygen calcium magnesium potassium sodium chloride bromide silicate ammonium phosphate nitrite nitrate nitrate_and_nitrate sulfate dissolved_iron total_iron Mn2plus dissolved_hydrogen_sulfide dissolved_organic_carbon TDN alkalinity methane hydrogen microbial_cell_abundance sample_name sample_title organism collection_date depth elev env_biome env_feature env_material geo_loc_name description ------------------------- SAMN03166127 PRJNA266365 47.75 -127.76 7.3 nd 51.9 3.9 6 469.1 557 0.89 1128 99 0.16 0 2 2 18.4 0.5 nd 1.4 0 10 101 0.56 nd nd 15400 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 30-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166128 PRJNA266365 47.75 -127.76 nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 30-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166137 PRJNA266365 47.76 -127.76 nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd Hole_1362A_basaltic_crustal_fluids hydrothermal_vent_metagenome 12-Jul-11 528 -2672 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1362A_basaltic_crustal_fluids SAMN03166138 PRJNA266365 47.76 -127.76 nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd Hole_1362B_basaltic_crustal_fluids hydrothermal_vent_metagenome 10-Jul-11 359 -2672 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1362B_basaltic_crustal_fluids SAMN03166122 PRJNA266850 47.75 -127.76 7.4 nd 53.2 3.7 6.4 468.8 553 0.89 1126 99 0.2 0 1.76 1.76 18.3 0.5 nd 1.5 0 14 100 0.53 nd nd 4000 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 20-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean dsrB_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166123 PRJNA266850 47.75 -127.76 7.5 nd 51.9 6.9 6.6 468.1 554 0.88 1060 92 0.43 0.06 3.18 3.24 19 0.2 nd 4.1 0 12 103 0.65 nd nd 50700 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 23-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean dsrB_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166125 PRJNA266850 47.89 -128.65 7.9 18 30.4 28.9 9.4 468.7 539 0.85 590 43 0.05 0 6.4 6.4 26.2 1.39 39.07 0.8 0 22 49 0.88 5.3 not detected nd nd Hole_1025C_basaltic_crustal_fluids hydrothermal_vent_metagenome 27-Jun-10 147 -2606 hydrothermal_fluid borehole water Pacific_Ocean dsrB_gene_survey_of_Hole_1025C_basaltic_crustal_fluids SAMN03166127 PRJNA266850 47.75 -127.76 7.3 nd 51.9 3.9 6 469.1 557 0.89 1128 99 0.16 0 2 2 18.4 0.5 nd 1.4 0 10 101 0.56 nd nd 15400 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 30-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean dsrB_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166097 PRJNA268250 47.76 -127.76 7.7 nd 10.4 53.4 10 445.3 517 0.76 162 0 2.93 0 40.7 40.7 27.5 0 nd nd nd nd 40 2.56 nd nd 87800 nd Northeast_Pacific_Ocean_deep_seawater marine_metagenome 8-Aug-08 0 -2644 seawater seawater water Pacific_Ocean SSU_rRNA_gene_survey_of_deep_seawater SAMN03166099 PRJNA268250 47.76 -127.76 7.8 nd 10.4 53.6 9.9 468.2 543 0.78 183 0 2.95 0 41.3 41.3 28 0 nd nd nd 40 43 2.42 nd nd 95000 nd Northeast_Pacific_Ocean_deep_seawater marine_metagenome 4-Sep-09 0 -2650 seawater seawater water Pacific_Ocean SSU_rRNA_gene_survey_of_deep_seawater SAMN03166105 PRJNA268250 47.76 -127.76 7.8 nd 10.5 53.3 10.5 473.6 545 0.84 174 0 2.8 0 40.3 40.3 28.2 0 nd 0 0 40 44 2.46 nd nd 76000 nd Northeast_Pacific_Ocean_deep_seawater marine_metagenome 28-Jun-10 0 -2648 seawater seawater water Pacific_Ocean SSU_rRNA_gene_survey_of_deep_seawater SAMN03166110 PRJNA268250 47.76 -127.76 nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd Northeast_Pacific_Ocean_deep_seawater marine_metagenome 29-Jun-10 0 -2655 seawater seawater water Pacific_Ocean SSU_rRNA_gene_survey_of_deep_seawater SAMN03166117 PRJNA268250 47.75 -127.76 7.4 nd 54.1 2 6 462 547 0.83 1150 102 0.1 0 0.61 0.61 17.2 1.1 nd 4.1 0.17 13 102 0.42 nd nd 9000 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 30-Aug-09 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166120 PRJNA268250 47.75 -127.76 7.4 nd 54 2.7 6.4 469.6 552 0.88 1153 102 0.1 0 0.9 0.9 18 0.5 nd 0.8 0 15 102 0.48 nd nd 15300 nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 19-Jun-10 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03217321 PRJNA268250 47.75 -127.76 7.5 nd 51.7 6.9 6.4 nd nd nd nd 98 0.45 nd 4.7 nd 18.7 0.8 nd nd nd 20.6 nd 0.73 1.95 0.65 nd nd Hole_1301A_basaltic_crustal_fluids hydrothermal_vent_metagenome 9-Aug-08 370 -2667 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1301A_basaltic_crustal_fluids SAMN03166125 PRJNA268251 47.89 -128.65 7.9 18 30.4 28.9 9.4 468.7 539 0.85 590 43 0.05 0 6.4 6.4 26.2 1.39 39.07 0.8 0 22 49 0.88 5.3 not detected nd nd Hole_1025C_basaltic_crustal_fluids hydrothermal_vent_metagenome 27-Jun-10 147 -2606 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1025C_basaltic_crustal_fluids SAMN03217322 PRJNA268251 47.76 -127.76 6.8 88 12 48.5 9.6 nd nd nd nd 2.5 <0.01 nd nd 40.6 27.2 1130 1360 nd nd 43 nd 0.88 not detected not detected nd nd Hole_1026B_basaltic_crustal_fluids hydrothermal_vent_metagenome 25-Jun-10 295 -2658 hydrothermal_fluid borehole water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1026B_basaltic_crustal_fluids SAMN03166087 PRJNA268252 47.29 -128.04 7.4 nd 13.3 47.6 11.9 498 608 0.83 493 1897 13.8 0 0 0 25.1 18.1 nd 37.3 nd 478 1897 5.79 nd nd nd nd IODP_borehole_1363B_sediment marine_sediment_metagenome 31-Aug-10 38 -2690 marine_sediment marine_sediment sediment Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363B_sediments SAMN03166089 PRJNA268252 47.29 -128.04 7.3 nd 12.6 48.7 11.9 479 555 0.85 456 166 15 0 0 0 28.3 51.3 nd 44.1 nd 336 166 3.76 nd nd nd nd IODP_borehole_1363G_sediment marine_sediment_metagenome 4-Sep-10 2 -2690 marine_sediment marine_sediment sediment Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363G_sediments SAMN03166090 PRJNA268252 47.29 -128.04 7.2 nd 21.1 38.4 11 492 568 0.84 433 166 6.83 0 0 0 26 49.6 nd 44.6 nd 294 166 3.29 nd nd nd nd IODP_borehole_1363G_sediment marine_sediment_metagenome 4-Sep-10 18 -2690 marine_sediment marine_sediment sediment Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363G_sediments SAMN03166091 PRJNA268252 47.29 -128.04 7.6 nd 10.4 52.8 12.1 488 592 0.79 439 110 15.2 0 0 0 28.6 8.3 nd 34.1 nd 403 110 4.23 nd nd nd nd IODP_borehole_1363B_sediment marine_sediment_metagenome 31-Aug-10 2 -2690 marine_sediment marine_sediment sediment Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363B_sediments SAMN03166094 PRJNA268252 47.29 -128.04 7.6 nd 10.4 52.8 12.1 488 592 0.79 439 110 15.2 0 0 0 28.6 8.3 nd 34.1 nd 403 110 4.23 nd nd nd nd IODP_borehole_1363B_sediment marine_sediment_metagenome 31-Aug-10 1 -2690 marine_sediment marine_sediment sediment Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363B_sediments SAMN03217320 PRJNA268252 47.29 -128.04 nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd nd IODP_borehole_1363B_sediment marine_sediment_metagenome 31-Aug-10 45 -2690 marine_sediment marine_sediment water Pacific_Ocean SSU_rRNA_gene_survey_of_Hole_1363B_sediments